Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm16476-201ENSMUST00000221544 139 ntBASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Gm17150-201ENSMUST00000165577 381 ntBASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Gm9257-201ENSMUST00000221254 232 ntBASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ttc28Q80XJ3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Gm11425-201ENSMUST00000119608 498 ntBASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Gm9396-201ENSMUST00000076703 567 ntBASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ttc28Q80XJ3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Mir1897-201ENSMUST00000122581 272 ntBASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc28Q80XJ3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms