Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Gm37230-201ENSMUST00000194491 818 ntBASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Gm18062-201ENSMUST00000208020 547 ntBASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Gm18055-201ENSMUST00000208254 547 ntBASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpap1Q80TE0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rpap1Q80TE0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rpap1Q80TE0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC23.08■■□□□ 1.29
Rpap1Q80TE0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC23.08■■□□□ 1.29
Rpap1Q80TE0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC23.08■■□□□ 1.29
Rpap1Q80TE0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC23.08■■□□□ 1.29
Rpap1Q80TE0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rpap1Q80TE0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rpap1Q80TE0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rpap1Q80TE0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rpap1Q80TE0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC23.08■■□□□ 1.29
Rpap1Q80TE0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rpap1Q80TE0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Rpap1Q80TE0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rpap1Q80TE0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
Rpap1Q80TE0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rpap1Q80TE0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Rpap1Q80TE0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rpap1Q80TE0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Rpap1Q80TE0 Gm9229-201ENSMUST00000222777 126 ntBASIC23.08■■□□□ 1.28
Rpap1Q80TE0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
Rpap1Q80TE0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rpap1Q80TE0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rpap1Q80TE0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rpap1Q80TE0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rpap1Q80TE0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rpap1Q80TE0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Rpap1Q80TE0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rpap1Q80TE0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC23.07■■□□□ 1.28
Rpap1Q80TE0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rpap1Q80TE0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rpap1Q80TE0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Rpap1Q80TE0 Gm9797-201ENSMUST00000052902 613 ntBASIC23.07■■□□□ 1.28
Rpap1Q80TE0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rpap1Q80TE0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Gm28760-201ENSMUST00000185995 736 ntBASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rpap1Q80TE0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Gm6266-201ENSMUST00000203844 806 ntBASIC23.05■■□□□ 1.28
Rpap1Q80TE0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Gm8131-201ENSMUST00000213783 1570 ntBASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rpap1Q80TE0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rpap1Q80TE0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rpap1Q80TE0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rpap1Q80TE0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC23.04■■□□□ 1.28
Rpap1Q80TE0 Gm31326-201ENSMUST00000191856 1048 ntBASIC23.04■■□□□ 1.28
Rpap1Q80TE0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Rpap1Q80TE0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rpap1Q80TE0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms