Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RfflQ6ZQM0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RfflQ6ZQM0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RfflQ6ZQM0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RfflQ6ZQM0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RfflQ6ZQM0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RfflQ6ZQM0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RfflQ6ZQM0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RfflQ6ZQM0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Mir5130-201ENSMUST00000175160 84 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm8825-201ENSMUST00000182565 998 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm4518-201ENSMUST00000182638 718 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm18101-201ENSMUST00000215769 548 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RfflQ6ZQM0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RfflQ6ZQM0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RfflQ6ZQM0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
RfflQ6ZQM0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RfflQ6ZQM0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RfflQ6ZQM0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RfflQ6ZQM0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RfflQ6ZQM0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RfflQ6ZQM0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms