Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Dhx40Q6PE54 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Gm27357-201ENSMUST00000183754 135 ntBASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Gm8655-201ENSMUST00000221159 852 ntBASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Dhx40Q6PE54 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dhx40Q6PE54 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Dhx40Q6PE54 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Dhx40Q6PE54 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms