Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.77■□□□□ 0.11
Hmgb4Q6P8W9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmgb4Q6P8W9 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.77■□□□□ 0.11
Hmgb4Q6P8W9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Gm15427-201ENSMUST00000117288 531 ntBASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Mir1895-201ENSMUST00000122615 79 ntBASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Gm27301-201ENSMUST00000184012 127 ntBASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmgb4Q6P8W9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hmgb4Q6P8W9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms