Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Celf4-206ENSMUST00000224553 1729 ntBASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Gm15173-201ENSMUST00000122049 433 ntBASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Gm11452-201ENSMUST00000122376 690 ntBASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf6Q6NVF9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
Cpsf6Q6NVF9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf6Q6NVF9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf6Q6NVF9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf6Q6NVF9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf6Q6NVF9 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Gm7153-201ENSMUST00000117092 455 ntBASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Gm7222-201ENSMUST00000117512 906 ntBASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Gm18489-201ENSMUST00000172565 551 ntBASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Gm5682-201ENSMUST00000173402 505 ntBASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Gm37153-201ENSMUST00000193637 231 ntBASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf6Q6NVF9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms