Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.8■□□□□ 0.12
Scube3Q66PY1 Gm16198-201ENSMUST00000118766 670 ntBASIC15.8■□□□□ 0.12
Scube3Q66PY1 Gm25911-201ENSMUST00000157621 56 ntBASIC15.8■□□□□ 0.12
Scube3Q66PY1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.8■□□□□ 0.12
Scube3Q66PY1 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.8■□□□□ 0.12
Scube3Q66PY1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scube3Q66PY1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Gm17271-201ENSMUST00000165535 355 ntBASIC15.79■□□□□ 0.12
Scube3Q66PY1 Gm42660-201ENSMUST00000197733 947 ntBASIC15.79■□□□□ 0.12
Scube3Q66PY1 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.79■□□□□ 0.12
Scube3Q66PY1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scube3Q66PY1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scube3Q66PY1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Gm9385-201ENSMUST00000117563 472 ntBASIC15.78■□□□□ 0.12
Scube3Q66PY1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Gm27301-201ENSMUST00000184012 127 ntBASIC15.78■□□□□ 0.12
Scube3Q66PY1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.78■□□□□ 0.12
Scube3Q66PY1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.78■□□□□ 0.12
Scube3Q66PY1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scube3Q66PY1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scube3Q66PY1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scube3Q66PY1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scube3Q66PY1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scube3Q66PY1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Scube3Q66PY1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scube3Q66PY1 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC15.77■□□□□ 0.12
Scube3Q66PY1 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.77■□□□□ 0.12
Scube3Q66PY1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Scube3Q66PY1 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC15.77■□□□□ 0.12
Scube3Q66PY1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.77■□□□□ 0.12
Scube3Q66PY1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scube3Q66PY1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scube3Q66PY1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scube3Q66PY1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scube3Q66PY1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scube3Q66PY1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Scube3Q66PY1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Scube3Q66PY1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms