Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col7a1Q63870 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Col7a1Q63870 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.21□□□□□ -0.45
Col7a1Q63870 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.21□□□□□ -0.45
Col7a1Q63870 Gm19078-201ENSMUST00000206311 727 ntBASIC12.21□□□□□ -0.45
Col7a1Q63870 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col7a1Q63870 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Col7a1Q63870 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col7a1Q63870 Gm3222-201ENSMUST00000071282 990 ntBASIC12.21□□□□□ -0.45
Col7a1Q63870 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Col7a1Q63870 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col7a1Q63870 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.21□□□□□ -0.45
Col7a1Q63870 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col7a1Q63870 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Col7a1Q63870 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.21□□□□□ -0.45
Col7a1Q63870 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.21□□□□□ -0.45
Col7a1Q63870 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col7a1Q63870 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.21□□□□□ -0.45
Col7a1Q63870 Gm44364-201ENSMUST00000198368 141 ntBASIC12.21□□□□□ -0.45
Col7a1Q63870 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.21□□□□□ -0.45
Col7a1Q63870 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Col7a1Q63870 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Col7a1Q63870 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Col7a1Q63870 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.21□□□□□ -0.46
Col7a1Q63870 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col7a1Q63870 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col7a1Q63870 Dancr-204ENSMUST00000132389 2347 ntBASIC12.21□□□□□ -0.46
Col7a1Q63870 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Col7a1Q63870 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col7a1Q63870 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col7a1Q63870 Gm43818-201ENSMUST00000200605 466 ntBASIC12.21□□□□□ -0.46
Col7a1Q63870 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col7a1Q63870 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col7a1Q63870 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col7a1Q63870 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col7a1Q63870 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col7a1Q63870 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Col7a1Q63870 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col7a1Q63870 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.2□□□□□ -0.46
Col7a1Q63870 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Col7a1Q63870 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col7a1Q63870 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.2□□□□□ -0.46
Col7a1Q63870 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col7a1Q63870 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col7a1Q63870 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.2□□□□□ -0.46
Col7a1Q63870 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col7a1Q63870 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col7a1Q63870 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col7a1Q63870 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col7a1Q63870 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col7a1Q63870 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col7a1Q63870 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col7a1Q63870 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.2□□□□□ -0.46
Col7a1Q63870 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.2□□□□□ -0.46
Col7a1Q63870 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.2□□□□□ -0.46
Col7a1Q63870 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Col7a1Q63870 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Col7a1Q63870 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.19□□□□□ -0.46
Col7a1Q63870 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.19□□□□□ -0.46
Col7a1Q63870 Gm15393-201ENSMUST00000120499 219 ntBASIC12.19□□□□□ -0.46
Col7a1Q63870 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.19□□□□□ -0.46
Col7a1Q63870 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.19□□□□□ -0.46
Col7a1Q63870 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col7a1Q63870 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col7a1Q63870 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.19□□□□□ -0.46
Col7a1Q63870 Gm16505-201ENSMUST00000179981 232 ntBASIC12.19□□□□□ -0.46
Col7a1Q63870 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.19□□□□□ -0.46
Col7a1Q63870 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.19□□□□□ -0.46
Col7a1Q63870 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col7a1Q63870 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col7a1Q63870 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col7a1Q63870 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col7a1Q63870 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.18□□□□□ -0.46
Col7a1Q63870 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.18□□□□□ -0.46
Col7a1Q63870 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col7a1Q63870 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.18□□□□□ -0.46
Col7a1Q63870 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.18□□□□□ -0.46
Col7a1Q63870 Olfr284-202ENSMUST00000206647 966 ntBASIC12.18□□□□□ -0.46
Col7a1Q63870 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col7a1Q63870 Gm8227-201ENSMUST00000223306 571 ntBASIC12.18□□□□□ -0.46
Col7a1Q63870 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col7a1Q63870 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col7a1Q63870 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col7a1Q63870 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms