Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AtmQ62388 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.03□□□□□ -0.16
AtmQ62388 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Gm45784-201ENSMUST00000188360 142 ntBASIC14.03□□□□□ -0.16
AtmQ62388 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AtmQ62388 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.03□□□□□ -0.16
AtmQ62388 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
AtmQ62388 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AtmQ62388 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AtmQ62388 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AtmQ62388 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
AtmQ62388 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AtmQ62388 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AtmQ62388 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AtmQ62388 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AtmQ62388 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AtmQ62388 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AtmQ62388 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AtmQ62388 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
AtmQ62388 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
AtmQ62388 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.02□□□□□ -0.17
AtmQ62388 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AtmQ62388 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AtmQ62388 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
AtmQ62388 Gm16476-201ENSMUST00000221544 139 ntBASIC14.02□□□□□ -0.17
AtmQ62388 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AtmQ62388 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AtmQ62388 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AtmQ62388 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AtmQ62388 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.01□□□□□ -0.17
AtmQ62388 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.01□□□□□ -0.17
AtmQ62388 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.01□□□□□ -0.17
AtmQ62388 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.01□□□□□ -0.17
AtmQ62388 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
AtmQ62388 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
AtmQ62388 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.01□□□□□ -0.17
AtmQ62388 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.01□□□□□ -0.17
AtmQ62388 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AtmQ62388 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AtmQ62388 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AtmQ62388 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AtmQ62388 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14□□□□□ -0.17
AtmQ62388 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
AtmQ62388 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14□□□□□ -0.17
AtmQ62388 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14□□□□□ -0.17
AtmQ62388 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
AtmQ62388 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14□□□□□ -0.17
AtmQ62388 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AtmQ62388 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AtmQ62388 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AtmQ62388 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
AtmQ62388 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14□□□□□ -0.17
AtmQ62388 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14□□□□□ -0.17
AtmQ62388 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14□□□□□ -0.17
AtmQ62388 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14□□□□□ -0.17
AtmQ62388 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AtmQ62388 Gm12390-201ENSMUST00000117897 397 ntBASIC14□□□□□ -0.17
AtmQ62388 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14□□□□□ -0.17
AtmQ62388 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14□□□□□ -0.17
AtmQ62388 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14□□□□□ -0.17
AtmQ62388 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14□□□□□ -0.17
AtmQ62388 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14□□□□□ -0.17
AtmQ62388 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14□□□□□ -0.17
AtmQ62388 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AtmQ62388 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AtmQ62388 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
AtmQ62388 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms