Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Sycp1Q62209 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sycp1Q62209 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.89■□□□□ 0.29
Sycp1Q62209 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.89■□□□□ 0.29
Sycp1Q62209 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.89■□□□□ 0.29
Sycp1Q62209 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Sycp1Q62209 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.89■□□□□ 0.29
Sycp1Q62209 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Sycp1Q62209 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Sycp1Q62209 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sycp1Q62209 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sycp1Q62209 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.88■□□□□ 0.29
Sycp1Q62209 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
Sycp1Q62209 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Sycp1Q62209 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sycp1Q62209 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sycp1Q62209 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Sycp1Q62209 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Sycp1Q62209 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.88■□□□□ 0.29
Sycp1Q62209 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.88■□□□□ 0.29
Sycp1Q62209 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.88■□□□□ 0.29
Sycp1Q62209 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sycp1Q62209 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.87■□□□□ 0.29
Sycp1Q62209 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.87■□□□□ 0.29
Sycp1Q62209 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.87■□□□□ 0.29
Sycp1Q62209 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Sycp1Q62209 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Sycp1Q62209 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Sycp1Q62209 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Gm14722-201ENSMUST00000118943 689 ntBASIC16.87■□□□□ 0.29
Sycp1Q62209 Gm37153-201ENSMUST00000193637 231 ntBASIC16.87■□□□□ 0.29
Sycp1Q62209 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.87■□□□□ 0.29
Sycp1Q62209 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Sycp1Q62209 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Sycp1Q62209 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.87■□□□□ 0.29
Sycp1Q62209 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.87■□□□□ 0.29
Sycp1Q62209 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sycp1Q62209 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sycp1Q62209 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sycp1Q62209 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Sycp1Q62209 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sycp1Q62209 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sycp1Q62209 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sycp1Q62209 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sycp1Q62209 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sycp1Q62209 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sycp1Q62209 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Sycp1Q62209 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sycp1Q62209 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sycp1Q62209 Gm13036-201ENSMUST00000117799 748 ntBASIC16.86■□□□□ 0.29
Sycp1Q62209 Gm12350-201ENSMUST00000121208 462 ntBASIC16.86■□□□□ 0.29
Sycp1Q62209 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms