Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SspnQ62147 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.61□□□□□ -0.39
SspnQ62147 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
SspnQ62147 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.61□□□□□ -0.39
SspnQ62147 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
SspnQ62147 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.61□□□□□ -0.39
SspnQ62147 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
SspnQ62147 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.61□□□□□ -0.39
SspnQ62147 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.61□□□□□ -0.39
SspnQ62147 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
SspnQ62147 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.61□□□□□ -0.39
SspnQ62147 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SspnQ62147 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SspnQ62147 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SspnQ62147 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SspnQ62147 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SspnQ62147 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SspnQ62147 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.6□□□□□ -0.39
SspnQ62147 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.6□□□□□ -0.39
SspnQ62147 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.6□□□□□ -0.39
SspnQ62147 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.6□□□□□ -0.39
SspnQ62147 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SspnQ62147 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.6□□□□□ -0.39
SspnQ62147 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SspnQ62147 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SspnQ62147 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SspnQ62147 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SspnQ62147 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.59□□□□□ -0.39
SspnQ62147 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.59□□□□□ -0.39
SspnQ62147 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SspnQ62147 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SspnQ62147 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.59□□□□□ -0.39
SspnQ62147 Ank2-226ENSMUST00000189368 339 ntBASIC12.59□□□□□ -0.39
SspnQ62147 Gm21362-201ENSMUST00000194272 928 ntBASIC12.59□□□□□ -0.39
SspnQ62147 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.59□□□□□ -0.39
SspnQ62147 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.59□□□□□ -0.39
SspnQ62147 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SspnQ62147 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SspnQ62147 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.59□□□□□ -0.39
SspnQ62147 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms