Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctr9Q62018 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctr9Q62018 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctr9Q62018 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ctr9Q62018 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Ctr9Q62018 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Ctr9Q62018 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Ctr9Q62018 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.7■□□□□ 0.42
Ctr9Q62018 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.7■□□□□ 0.42
Ctr9Q62018 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Gm11745-201ENSMUST00000121669 448 ntBASIC17.7■□□□□ 0.42
Ctr9Q62018 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ctr9Q62018 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.7■□□□□ 0.42
Ctr9Q62018 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ctr9Q62018 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctr9Q62018 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ctr9Q62018 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.69■□□□□ 0.42
Ctr9Q62018 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.69■□□□□ 0.42
Ctr9Q62018 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.69■□□□□ 0.42
Ctr9Q62018 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ctr9Q62018 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ctr9Q62018 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.69■□□□□ 0.42
Ctr9Q62018 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.69■□□□□ 0.42
Ctr9Q62018 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ctr9Q62018 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Ctr9Q62018 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Ctr9Q62018 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.69■□□□□ 0.42
Ctr9Q62018 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctr9Q62018 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ctr9Q62018 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ctr9Q62018 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctr9Q62018 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctr9Q62018 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctr9Q62018 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ctr9Q62018 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ctr9Q62018 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctr9Q62018 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctr9Q62018 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctr9Q62018 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Ctr9Q62018 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctr9Q62018 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctr9Q62018 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctr9Q62018 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Ctr9Q62018 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ctr9Q62018 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.68■□□□□ 0.42
Ctr9Q62018 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctr9Q62018 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctr9Q62018 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ctr9Q62018 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.67■□□□□ 0.42
Ctr9Q62018 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctr9Q62018 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctr9Q62018 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctr9Q62018 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctr9Q62018 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctr9Q62018 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctr9Q62018 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ctr9Q62018 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctr9Q62018 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctr9Q62018 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ctr9Q62018 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ctr9Q62018 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.67■□□□□ 0.42
Ctr9Q62018 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
Ctr9Q62018 Gm16026-204ENSMUST00000162652 683 ntBASIC17.67■□□□□ 0.42
Ctr9Q62018 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms