Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.68■□□□□ 0.58
Irf9Q61179 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Irf9Q61179 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Irf9Q61179 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf9Q61179 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf9Q61179 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Irf9Q61179 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf9Q61179 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf9Q61179 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.67■□□□□ 0.58
Irf9Q61179 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf9Q61179 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.67■□□□□ 0.58
Irf9Q61179 Gm38225-201ENSMUST00000194001 393 ntBASIC18.67■□□□□ 0.58
Irf9Q61179 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.67■□□□□ 0.58
Irf9Q61179 Gm5779-201ENSMUST00000218467 910 ntBASIC18.67■□□□□ 0.58
Irf9Q61179 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Irf9Q61179 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf9Q61179 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf9Q61179 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Irf9Q61179 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.67■□□□□ 0.58
Irf9Q61179 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf9Q61179 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf9Q61179 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf9Q61179 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Irf9Q61179 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Irf9Q61179 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.66■□□□□ 0.58
Irf9Q61179 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Irf9Q61179 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Irf9Q61179 AA543401-201ENSMUST00000164248 1269 ntBASIC18.66■□□□□ 0.58
Irf9Q61179 Gm22175-201ENSMUST00000175007 78 ntBASIC18.66■□□□□ 0.58
Irf9Q61179 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.66■□□□□ 0.58
Irf9Q61179 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
Irf9Q61179 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.66■□□□□ 0.58
Irf9Q61179 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.66■□□□□ 0.58
Irf9Q61179 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf9Q61179 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.65■□□□□ 0.58
Irf9Q61179 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 BC037039-201ENSMUST00000192003 2205 ntBASIC18.65■□□□□ 0.58
Irf9Q61179 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.65■□□□□ 0.58
Irf9Q61179 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.65■□□□□ 0.58
Irf9Q61179 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.65■□□□□ 0.58
Irf9Q61179 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.65■□□□□ 0.58
Irf9Q61179 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.65■□□□□ 0.58
Irf9Q61179 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Irf9Q61179 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf9Q61179 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Irf9Q61179 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Irf9Q61179 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Irf9Q61179 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Irf9Q61179 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf9Q61179 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf9Q61179 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf9Q61179 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Irf9Q61179 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf9Q61179 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Irf9Q61179 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms