Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.39□□□□□ -0.11
Xrcc1Q60596 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.39□□□□□ -0.11
Xrcc1Q60596 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xrcc1Q60596 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.38□□□□□ -0.11
Xrcc1Q60596 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.38□□□□□ -0.11
Xrcc1Q60596 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Gm10175-201ENSMUST00000086013 645 ntBASIC14.38□□□□□ -0.11
Xrcc1Q60596 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.38□□□□□ -0.11
Xrcc1Q60596 BC037039-201ENSMUST00000192003 2205 ntBASIC14.38□□□□□ -0.11
Xrcc1Q60596 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xrcc1Q60596 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Gm11594-201ENSMUST00000122313 162 ntBASIC14.37□□□□□ -0.11
Xrcc1Q60596 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Xrcc1Q60596 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Gm2272-201ENSMUST00000194903 582 ntBASIC14.37□□□□□ -0.11
Xrcc1Q60596 Gm45747-201ENSMUST00000212203 999 ntBASIC14.37□□□□□ -0.11
Xrcc1Q60596 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.37□□□□□ -0.11
Xrcc1Q60596 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.37□□□□□ -0.11
Xrcc1Q60596 Celf4-206ENSMUST00000224553 1729 ntBASIC14.37□□□□□ -0.11
Xrcc1Q60596 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Xrcc1Q60596 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.37□□□□□ -0.11
Xrcc1Q60596 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.37□□□□□ -0.11
Xrcc1Q60596 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Xrcc1Q60596 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Xrcc1Q60596 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Xrcc1Q60596 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Xrcc1Q60596 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Xrcc1Q60596 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.36□□□□□ -0.11
Xrcc1Q60596 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.36□□□□□ -0.11
Xrcc1Q60596 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.36□□□□□ -0.11
Xrcc1Q60596 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.36□□□□□ -0.11
Xrcc1Q60596 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Xrcc1Q60596 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Xrcc1Q60596 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Xrcc1Q60596 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Xrcc1Q60596 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms