Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav5d-4Q5R1F6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.96□□□□□ -0.34
Trav5d-4Q5R1F6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav5d-4Q5R1F6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav5d-4Q5R1F6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav5d-4Q5R1F6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav5d-4Q5R1F6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Trav5d-4Q5R1F6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav5d-4Q5R1F6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav5d-4Q5R1F6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav5d-4Q5R1F6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav5d-4Q5R1F6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Gm7222-201ENSMUST00000117512 906 ntBASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Gm5682-201ENSMUST00000173402 505 ntBASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Gm37153-201ENSMUST00000193637 231 ntBASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Gm5864-201ENSMUST00000202263 970 ntBASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5d-4Q5R1F6 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Gm7862-201ENSMUST00000121461 292 ntBASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Gm18489-201ENSMUST00000172565 551 ntBASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Gm7230-201ENSMUST00000173026 815 ntBASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.93□□□□□ -0.34
Trav5d-4Q5R1F6 Celf4-206ENSMUST00000224553 1729 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms