Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm9726-201ENSMUST00000180321 678 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm38241-201ENSMUST00000192641 898 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm43118-201ENSMUST00000199149 775 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm11524-201ENSMUST00000119349 807 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm5425-201ENSMUST00000214125 459 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Gm7399-201ENSMUST00000032395 858 ntBASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col27a1Q5QNQ9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Gm11803-201ENSMUST00000119966 444 ntBASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Gm9182-201ENSMUST00000217829 639 ntBASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Dancr-204ENSMUST00000132389 2347 ntBASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col27a1Q5QNQ9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms