Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.49□□□□□ -0.41
Znf48Q3US17 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.49□□□□□ -0.41
Znf48Q3US17 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Gm12497-201ENSMUST00000138778 237 ntBASIC12.49□□□□□ -0.41
Znf48Q3US17 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.49□□□□□ -0.41
Znf48Q3US17 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.49□□□□□ -0.41
Znf48Q3US17 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.49□□□□□ -0.41
Znf48Q3US17 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.49□□□□□ -0.41
Znf48Q3US17 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.49□□□□□ -0.41
Znf48Q3US17 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Znf48Q3US17 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.48□□□□□ -0.41
Znf48Q3US17 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Znf48Q3US17 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.48□□□□□ -0.41
Znf48Q3US17 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.48□□□□□ -0.41
Znf48Q3US17 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Znf48Q3US17 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.48□□□□□ -0.41
Znf48Q3US17 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.48□□□□□ -0.41
Znf48Q3US17 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.48□□□□□ -0.41
Znf48Q3US17 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Znf48Q3US17 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Znf48Q3US17 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Znf48Q3US17 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Znf48Q3US17 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.47□□□□□ -0.41
Znf48Q3US17 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Znf48Q3US17 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Znf48Q3US17 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Znf48Q3US17 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Znf48Q3US17 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Znf48Q3US17 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Znf48Q3US17 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Znf48Q3US17 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.47□□□□□ -0.41
Znf48Q3US17 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.47□□□□□ -0.41
Znf48Q3US17 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.47□□□□□ -0.41
Znf48Q3US17 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.47□□□□□ -0.41
Znf48Q3US17 Gm2594-201ENSMUST00000214774 742 ntBASIC12.47□□□□□ -0.41
Znf48Q3US17 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.47□□□□□ -0.41
Znf48Q3US17 Gm5186-201ENSMUST00000218781 920 ntBASIC12.47□□□□□ -0.41
Znf48Q3US17 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Znf48Q3US17 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Znf48Q3US17 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Znf48Q3US17 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Znf48Q3US17 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.47□□□□□ -0.41
Znf48Q3US17 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Znf48Q3US17 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Znf48Q3US17 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Znf48Q3US17 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Znf48Q3US17 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Znf48Q3US17 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Znf48Q3US17 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.47□□□□□ -0.41
Znf48Q3US17 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Znf48Q3US17 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Znf48Q3US17 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Znf48Q3US17 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.46□□□□□ -0.41
Znf48Q3US17 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Znf48Q3US17 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Znf48Q3US17 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms