Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Gm13365-201ENSMUST00000121188 973 ntBASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-3Q3UHX8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-3Q3UHX8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Gm6973-201ENSMUST00000117080 721 ntBASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Rprl2-201ENSMUST00000157150 290 ntBASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Gm26308-201ENSMUST00000157768 69 ntBASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx6-3Q3UHX8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms