Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf44Q3UHJ8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf44Q3UHJ8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Gm8000-201ENSMUST00000188378 592 ntBASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Rnf44Q3UHJ8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Gm5177-201ENSMUST00000183092 997 ntBASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Mir8117-201ENSMUST00000184773 107 ntBASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rnf44Q3UHJ8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Gm14494-201ENSMUST00000118786 435 ntBASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Gm43767-201ENSMUST00000198933 381 ntBASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf44Q3UHJ8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms