Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Rapgef1Q3UHC1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Gm27646-201ENSMUST00000183989 110 ntBASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Gm2213-201ENSMUST00000197485 688 ntBASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Gm15590-201ENSMUST00000078419 552 ntBASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rapgef1Q3UHC1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rapgef1Q3UHC1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rapgef1Q3UHC1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Rapgef1Q3UHC1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.45■□□□□ 0.22
Rapgef1Q3UHC1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Gm13036-201ENSMUST00000117799 748 ntBASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Gm11764-201ENSMUST00000120221 623 ntBASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Gm15467-201ENSMUST00000120582 445 ntBASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.44■□□□□ 0.22
Rapgef1Q3UHC1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms