Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Gm5479-201ENSMUST00000160578 435 ntBASIC13.73□□□□□ -0.21
Spg11Q3UHA3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Gm29127-201ENSMUST00000188304 517 ntBASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.73□□□□□ -0.21
Spg11Q3UHA3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Gm26083-201ENSMUST00000157904 193 ntBASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Gm19184-201ENSMUST00000196798 928 ntBASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Gm45453-201ENSMUST00000211758 853 ntBASIC13.73□□□□□ -0.21
Spg11Q3UHA3 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
Spg11Q3UHA3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Gm6222-201ENSMUST00000120787 396 ntBASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Gm12134-201ENSMUST00000122109 520 ntBASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Nsd1-205ENSMUST00000224693 852 ntBASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Mir125a-201ENSMUST00000083545 68 ntBASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Gm14263-201ENSMUST00000117955 746 ntBASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Spg11Q3UHA3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms