Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctdnep1Q3TP92 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ctdnep1Q3TP92 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.35■□□□□ 0.37
Ctdnep1Q3TP92 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctdnep1Q3TP92 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Ctdnep1Q3TP92 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctdnep1Q3TP92 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctdnep1Q3TP92 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctdnep1Q3TP92 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ctdnep1Q3TP92 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Ctdnep1Q3TP92 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctdnep1Q3TP92 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ctdnep1Q3TP92 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.33■□□□□ 0.36
Ctdnep1Q3TP92 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctdnep1Q3TP92 Mzt1-203ENSMUST00000227948 952 ntBASIC17.33■□□□□ 0.36
Ctdnep1Q3TP92 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctdnep1Q3TP92 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctdnep1Q3TP92 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctdnep1Q3TP92 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctdnep1Q3TP92 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctdnep1Q3TP92 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctdnep1Q3TP92 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Ctdnep1Q3TP92 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms