Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Gm13836-201ENSMUST00000121159 501 ntBASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Gm12895-201ENSMUST00000122214 226 ntBASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nhej1Q3KNJ2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Gm7284-201ENSMUST00000131667 944 ntBASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nhej1Q3KNJ2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms