Protein–RNA interactions for Protein: Q0P5V2

Sobp, Sine oculis-binding protein homolog, mousemouse

Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SobpQ0P5V2 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.01■□□□□ 0.31
SobpQ0P5V2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SobpQ0P5V2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SobpQ0P5V2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SobpQ0P5V2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SobpQ0P5V2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SobpQ0P5V2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SobpQ0P5V2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SobpQ0P5V2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SobpQ0P5V2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SobpQ0P5V2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
SobpQ0P5V2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17■□□□□ 0.31
SobpQ0P5V2 Gm12384-201ENSMUST00000119228 919 ntBASIC17■□□□□ 0.31
SobpQ0P5V2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC17■□□□□ 0.31
SobpQ0P5V2 Gm5279-201ENSMUST00000199575 745 ntBASIC17■□□□□ 0.31
SobpQ0P5V2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17■□□□□ 0.31
SobpQ0P5V2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SobpQ0P5V2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.99■□□□□ 0.31
SobpQ0P5V2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SobpQ0P5V2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SobpQ0P5V2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SobpQ0P5V2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
SobpQ0P5V2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SobpQ0P5V2 Gm7287-201ENSMUST00000205267 602 ntBASIC16.99■□□□□ 0.31
SobpQ0P5V2 Gm45880-201ENSMUST00000213041 853 ntBASIC16.99■□□□□ 0.31
SobpQ0P5V2 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.99■□□□□ 0.31
SobpQ0P5V2 Gm45930-201ENSMUST00000221330 292 ntBASIC16.99■□□□□ 0.31
SobpQ0P5V2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SobpQ0P5V2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SobpQ0P5V2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.99■□□□□ 0.31
SobpQ0P5V2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SobpQ0P5V2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.99■□□□□ 0.31
SobpQ0P5V2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SobpQ0P5V2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SobpQ0P5V2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SobpQ0P5V2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SobpQ0P5V2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SobpQ0P5V2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Mir877-201ENSMUST00000104738 85 ntBASIC16.98■□□□□ 0.31
SobpQ0P5V2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.98■□□□□ 0.31
SobpQ0P5V2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Gm27516-201ENSMUST00000184237 98 ntBASIC16.98■□□□□ 0.31
SobpQ0P5V2 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.98■□□□□ 0.31
SobpQ0P5V2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.98■□□□□ 0.31
SobpQ0P5V2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.98■□□□□ 0.31
SobpQ0P5V2 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.98■□□□□ 0.31
SobpQ0P5V2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Gm9823-201ENSMUST00000051212 327 ntBASIC16.98■□□□□ 0.31
SobpQ0P5V2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.98■□□□□ 0.31
SobpQ0P5V2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SobpQ0P5V2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.98■□□□□ 0.31
SobpQ0P5V2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SobpQ0P5V2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.97■□□□□ 0.31
SobpQ0P5V2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SobpQ0P5V2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms