Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc4Q08624 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.4□□□□□ -0.1
Hoxc4Q08624 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc4Q08624 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.39□□□□□ -0.11
Hoxc4Q08624 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.39□□□□□ -0.11
Hoxc4Q08624 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Gm13015-201ENSMUST00000118674 204 ntBASIC14.39□□□□□ -0.11
Hoxc4Q08624 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.39□□□□□ -0.11
Hoxc4Q08624 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.39□□□□□ -0.11
Hoxc4Q08624 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc4Q08624 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Gm6415-201ENSMUST00000118488 348 ntBASIC14.38□□□□□ -0.11
Hoxc4Q08624 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms