Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Tff1Q08423 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Tff1Q08423 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Tff1Q08423 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Tff1Q08423 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Tff1Q08423 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.52□□□□□ -0.41
Tff1Q08423 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Tff1Q08423 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.51□□□□□ -0.41
Tff1Q08423 Gm7862-201ENSMUST00000121461 292 ntBASIC12.51□□□□□ -0.41
Tff1Q08423 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.51□□□□□ -0.41
Tff1Q08423 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.51□□□□□ -0.41
Tff1Q08423 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.51□□□□□ -0.41
Tff1Q08423 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.51□□□□□ -0.41
Tff1Q08423 Gm25745-201ENSMUST00000174945 133 ntBASIC12.51□□□□□ -0.41
Tff1Q08423 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.51□□□□□ -0.41
Tff1Q08423 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Tff1Q08423 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Tff1Q08423 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Tff1Q08423 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tff1Q08423 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Tff1Q08423 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Tff1Q08423 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Tff1Q08423 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Tff1Q08423 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Tff1Q08423 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Tff1Q08423 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.5□□□□□ -0.41
Tff1Q08423 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.5□□□□□ -0.41
Tff1Q08423 Gm44454-201ENSMUST00000198541 138 ntBASIC12.5□□□□□ -0.41
Tff1Q08423 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.5□□□□□ -0.41
Tff1Q08423 Gm7506-201ENSMUST00000207758 815 ntBASIC12.5□□□□□ -0.41
Tff1Q08423 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.5□□□□□ -0.41
Tff1Q08423 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.5□□□□□ -0.41
Tff1Q08423 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.5□□□□□ -0.41
Tff1Q08423 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.5□□□□□ -0.41
Tff1Q08423 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Tff1Q08423 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tff1Q08423 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Tff1Q08423 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.49□□□□□ -0.41
Tff1Q08423 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Tff1Q08423 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Tff1Q08423 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.49□□□□□ -0.41
Tff1Q08423 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms