Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC18.71■□□□□ 0.59
Cacna1sQ02789 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Gm27486-201ENSMUST00000184923 80 ntBASIC18.71■□□□□ 0.59
Cacna1sQ02789 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.71■□□□□ 0.59
Cacna1sQ02789 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.71■□□□□ 0.59
Cacna1sQ02789 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1sQ02789 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.71■□□□□ 0.59
Cacna1sQ02789 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1sQ02789 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cacna1sQ02789 AL645783.1-201ENSMUST00000221416 1832 ntBASIC18.7■□□□□ 0.58
Cacna1sQ02789 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1sQ02789 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1sQ02789 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1sQ02789 Gm9726-201ENSMUST00000180321 678 ntBASIC18.7■□□□□ 0.58
Cacna1sQ02789 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cacna1sQ02789 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cacna1sQ02789 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1sQ02789 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1sQ02789 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1sQ02789 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1sQ02789 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Cacna1sQ02789 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1sQ02789 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Cacna1sQ02789 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1sQ02789 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1sQ02789 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Gm12329-201ENSMUST00000120829 1007 ntBASIC18.69■□□□□ 0.58
Cacna1sQ02789 Gm10275-202ENSMUST00000168697 495 ntBASIC18.69■□□□□ 0.58
Cacna1sQ02789 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Mir3547-201ENSMUST00000175461 88 ntBASIC18.69■□□□□ 0.58
Cacna1sQ02789 Gm8652-201ENSMUST00000181363 964 ntBASIC18.69■□□□□ 0.58
Cacna1sQ02789 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 AC156560.2-201ENSMUST00000221232 264 ntBASIC18.69■□□□□ 0.58
Cacna1sQ02789 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC18.69■□□□□ 0.58
Cacna1sQ02789 AC154806.6-201ENSMUST00000228192 202 ntBASIC18.69■□□□□ 0.58
Cacna1sQ02789 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Gm10275-201ENSMUST00000092620 635 ntBASIC18.69■□□□□ 0.58
Cacna1sQ02789 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.69■□□□□ 0.58
Cacna1sQ02789 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.69■□□□□ 0.58
Cacna1sQ02789 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Gm42442-201ENSMUST00000197951 1133 ntBASIC18.69■□□□□ 0.58
Cacna1sQ02789 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1sQ02789 AC159747.1-201ENSMUST00000219903 265 ntBASIC18.69■□□□□ 0.58
Cacna1sQ02789 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Gm11524-201ENSMUST00000119349 807 ntBASIC18.68■□□□□ 0.58
Cacna1sQ02789 Gm11814-201ENSMUST00000119515 929 ntBASIC18.68■□□□□ 0.58
Cacna1sQ02789 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Mir8109-201ENSMUST00000184375 117 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms