Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.73■□□□□ 0.59
Smarcc1P97496 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc1P97496 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc1P97496 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Smarcc1P97496 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smarcc1P97496 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc1P97496 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc1P97496 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.73■□□□□ 0.59
Smarcc1P97496 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc1P97496 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc1P97496 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.73■□□□□ 0.59
Smarcc1P97496 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc1P97496 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Smarcc1P97496 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.72■□□□□ 0.59
Smarcc1P97496 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.72■□□□□ 0.59
Smarcc1P97496 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.72■□□□□ 0.59
Smarcc1P97496 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.72■□□□□ 0.59
Smarcc1P97496 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.72■□□□□ 0.59
Smarcc1P97496 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.72■□□□□ 0.59
Smarcc1P97496 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Smarcc1P97496 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc1P97496 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smarcc1P97496 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
Smarcc1P97496 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Smarcc1P97496 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.71■□□□□ 0.59
Smarcc1P97496 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Smarcc1P97496 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Smarcc1P97496 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.71■□□□□ 0.59
Smarcc1P97496 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smarcc1P97496 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smarcc1P97496 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.71■□□□□ 0.59
Smarcc1P97496 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.71■□□□□ 0.59
Smarcc1P97496 Gm6180-201ENSMUST00000065243 498 ntBASIC18.71■□□□□ 0.59
Smarcc1P97496 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Smarcc1P97496 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc1P97496 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc1P97496 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc1P97496 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smarcc1P97496 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc1P97496 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.7■□□□□ 0.58
Smarcc1P97496 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smarcc1P97496 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc1P97496 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc1P97496 Gm6912-201ENSMUST00000117218 544 ntBASIC18.7■□□□□ 0.58
Smarcc1P97496 Gm4875-201ENSMUST00000118257 786 ntBASIC18.7■□□□□ 0.58
Smarcc1P97496 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc1P97496 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.7■□□□□ 0.58
Smarcc1P97496 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.7■□□□□ 0.58
Smarcc1P97496 Gm8515-201ENSMUST00000194852 576 ntBASIC18.7■□□□□ 0.58
Smarcc1P97496 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc1P97496 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc1P97496 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc1P97496 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc1P97496 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc1P97496 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc1P97496 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc1P97496 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.69■□□□□ 0.58
Smarcc1P97496 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.69■□□□□ 0.58
Smarcc1P97496 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Smarcc1P97496 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.69■□□□□ 0.58
Smarcc1P97496 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms