Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SgcbP82349 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.41□□□□□ -0.26
SgcbP82349 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
SgcbP82349 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.41□□□□□ -0.26
SgcbP82349 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SgcbP82349 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SgcbP82349 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SgcbP82349 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SgcbP82349 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
SgcbP82349 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.41□□□□□ -0.26
SgcbP82349 Gm12008-201ENSMUST00000117791 755 ntBASIC13.41□□□□□ -0.26
SgcbP82349 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.41□□□□□ -0.26
SgcbP82349 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.41□□□□□ -0.26
SgcbP82349 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SgcbP82349 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcbP82349 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcbP82349 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SgcbP82349 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcbP82349 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcbP82349 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
SgcbP82349 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.4□□□□□ -0.26
SgcbP82349 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
SgcbP82349 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcbP82349 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcbP82349 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcbP82349 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SgcbP82349 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.4□□□□□ -0.26
SgcbP82349 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SgcbP82349 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.4□□□□□ -0.26
SgcbP82349 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.4□□□□□ -0.26
SgcbP82349 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.4□□□□□ -0.26
SgcbP82349 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.4□□□□□ -0.26
SgcbP82349 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.4□□□□□ -0.26
SgcbP82349 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcbP82349 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.4□□□□□ -0.26
SgcbP82349 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcbP82349 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcbP82349 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcbP82349 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcbP82349 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.4□□□□□ -0.27
SgcbP82349 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SgcbP82349 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
SgcbP82349 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SgcbP82349 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
SgcbP82349 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SgcbP82349 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SgcbP82349 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.39□□□□□ -0.27
SgcbP82349 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SgcbP82349 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SgcbP82349 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.39□□□□□ -0.27
SgcbP82349 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SgcbP82349 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms