Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CiitaP79621 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.27■□□□□ 0.2
CiitaP79621 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.27■□□□□ 0.2
CiitaP79621 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.27■□□□□ 0.2
CiitaP79621 Gm15483-201ENSMUST00000120338 456 ntBASIC16.27■□□□□ 0.2
CiitaP79621 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CiitaP79621 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CiitaP79621 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CiitaP79621 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CiitaP79621 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CiitaP79621 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CiitaP79621 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CiitaP79621 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.27■□□□□ 0.2
CiitaP79621 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CiitaP79621 Gm43125-201ENSMUST00000201724 730 ntBASIC16.27■□□□□ 0.2
CiitaP79621 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CiitaP79621 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CiitaP79621 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.27■□□□□ 0.2
CiitaP79621 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CiitaP79621 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CiitaP79621 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CiitaP79621 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CiitaP79621 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CiitaP79621 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CiitaP79621 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CiitaP79621 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CiitaP79621 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Asic1-205ENSMUST00000228185 1818 ntBASIC16.26■□□□□ 0.19
CiitaP79621 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CiitaP79621 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.26■□□□□ 0.19
CiitaP79621 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.26■□□□□ 0.19
CiitaP79621 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.26■□□□□ 0.19
CiitaP79621 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.26■□□□□ 0.19
CiitaP79621 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CiitaP79621 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.26■□□□□ 0.19
CiitaP79621 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.26■□□□□ 0.19
CiitaP79621 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CiitaP79621 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CiitaP79621 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Gm22065-201ENSMUST00000103753 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm22066-201ENSMUST00000103761 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm24932-201ENSMUST00000103763 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm24115-201ENSMUST00000103799 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm22190-201ENSMUST00000103827 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm22191-201ENSMUST00000103831 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm25287-201ENSMUST00000103846 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm24721-201ENSMUST00000103849 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm22918-201ENSMUST00000103855 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm28018-201ENSMUST00000103869 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm26399-201ENSMUST00000103937 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CiitaP79621 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CiitaP79621 Gm25925-201ENSMUST00000158314 306 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.25■□□□□ 0.19
CiitaP79621 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.25■□□□□ 0.19
CiitaP79621 Gm25349-201ENSMUST00000177728 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm23616-201ENSMUST00000177797 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm25871-201ENSMUST00000177816 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm24752-201ENSMUST00000178240 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm24496-201ENSMUST00000178287 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm25649-201ENSMUST00000178476 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm25548-201ENSMUST00000178681 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm23147-201ENSMUST00000178841 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm26095-201ENSMUST00000179270 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm22171-201ENSMUST00000179283 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm23936-201ENSMUST00000179354 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm22619-201ENSMUST00000179516 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm25255-201ENSMUST00000179579 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm24755-201ENSMUST00000179691 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm26506-201ENSMUST00000179692 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm25086-201ENSMUST00000179931 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm23243-201ENSMUST00000180047 110 ntBASIC16.25■□□□□ 0.19
CiitaP79621 Gm24659-201ENSMUST00000180212 110 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms