Protein–RNA interactions for Protein: P70338

Gfi1, Zinc finger protein Gfi-1, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1P70338 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gfi1P70338 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gfi1P70338 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Gfi1P70338 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Gfi1P70338 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.28□□□□□ -0.12
Gfi1P70338 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.28□□□□□ -0.12
Gfi1P70338 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.28□□□□□ -0.12
Gfi1P70338 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfi1P70338 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfi1P70338 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfi1P70338 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfi1P70338 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.27□□□□□ -0.12
Gfi1P70338 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfi1P70338 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.27□□□□□ -0.12
Gfi1P70338 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfi1P70338 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfi1P70338 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Gfi1P70338 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfi1P70338 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gfi1P70338 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfi1P70338 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfi1P70338 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfi1P70338 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Gfi1P70338 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gfi1P70338 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gfi1P70338 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Gfi1P70338 Mir5126-201ENSMUST00000175513 77 ntBASIC14.27□□□□□ -0.13
Gfi1P70338 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Gfi1P70338 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Gfi1P70338 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Gfi1P70338 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.27□□□□□ -0.13
Gfi1P70338 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfi1P70338 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.27□□□□□ -0.13
Gfi1P70338 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Gfi1P70338 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Gfi1P70338 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Gfi1P70338 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Gfi1P70338 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfi1P70338 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfi1P70338 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Gfi1P70338 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfi1P70338 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfi1P70338 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gfi1P70338 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Gfi1P70338 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfi1P70338 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gfi1P70338 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfi1P70338 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Gfi1P70338 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gfi1P70338 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.26□□□□□ -0.13
Gfi1P70338 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Gfi1P70338 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.26□□□□□ -0.13
Gfi1P70338 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.26□□□□□ -0.13
Gfi1P70338 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.26□□□□□ -0.13
Gfi1P70338 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.26□□□□□ -0.13
Gfi1P70338 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Gfi1P70338 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gfi1P70338 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfi1P70338 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Gfi1P70338 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfi1P70338 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfi1P70338 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfi1P70338 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gfi1P70338 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms