Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nup43P59235 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.21□□□□□ -0.13
Nup43P59235 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.21□□□□□ -0.13
Nup43P59235 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
Nup43P59235 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.21□□□□□ -0.13
Nup43P59235 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nup43P59235 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup43P59235 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup43P59235 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup43P59235 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup43P59235 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup43P59235 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup43P59235 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup43P59235 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Nup43P59235 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup43P59235 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup43P59235 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nup43P59235 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.2□□□□□ -0.14
Nup43P59235 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nup43P59235 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Nup43P59235 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Nup43P59235 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.2□□□□□ -0.14
Nup43P59235 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Nup43P59235 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nup43P59235 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nup43P59235 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup43P59235 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nup43P59235 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.19□□□□□ -0.14
Nup43P59235 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.19□□□□□ -0.14
Nup43P59235 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nup43P59235 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.19□□□□□ -0.14
Nup43P59235 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Gm11779-201ENSMUST00000118541 368 ntBASIC14.19□□□□□ -0.14
Nup43P59235 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.19□□□□□ -0.14
Nup43P59235 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Gm43767-201ENSMUST00000198933 381 ntBASIC14.19□□□□□ -0.14
Nup43P59235 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.19□□□□□ -0.14
Nup43P59235 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.19□□□□□ -0.14
Nup43P59235 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.19□□□□□ -0.14
Nup43P59235 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nup43P59235 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup43P59235 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup43P59235 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup43P59235 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nup43P59235 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup43P59235 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup43P59235 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup43P59235 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup43P59235 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup43P59235 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.18□□□□□ -0.14
Nup43P59235 Gm15467-201ENSMUST00000120582 445 ntBASIC14.18□□□□□ -0.14
Nup43P59235 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms