Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Usp25P57080 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.06■□□□□ 0.32
Usp25P57080 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Gm9172-201ENSMUST00000212092 954 ntBASIC17.06■□□□□ 0.32
Usp25P57080 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.06■□□□□ 0.32
Usp25P57080 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Celf4-206ENSMUST00000224553 1729 ntBASIC17.06■□□□□ 0.32
Usp25P57080 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp25P57080 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Usp25P57080 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Usp25P57080 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.05■□□□□ 0.32
Usp25P57080 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Usp25P57080 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.05■□□□□ 0.32
Usp25P57080 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp25P57080 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Usp25P57080 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp25P57080 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.04■□□□□ 0.32
Usp25P57080 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Usp25P57080 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.04■□□□□ 0.32
Usp25P57080 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.04■□□□□ 0.32
Usp25P57080 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.04■□□□□ 0.32
Usp25P57080 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.04■□□□□ 0.32
Usp25P57080 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.04■□□□□ 0.32
Usp25P57080 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.04■□□□□ 0.32
Usp25P57080 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp25P57080 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp25P57080 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp25P57080 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Gm12008-201ENSMUST00000117791 755 ntBASIC17.03■□□□□ 0.32
Usp25P57080 Gm15794-201ENSMUST00000120182 631 ntBASIC17.03■□□□□ 0.32
Usp25P57080 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Usp25P57080 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Usp25P57080 Gm7977-201ENSMUST00000193787 748 ntBASIC17.03■□□□□ 0.32
Usp25P57080 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp25P57080 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.03■□□□□ 0.32
Usp25P57080 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Usp25P57080 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp25P57080 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
Usp25P57080 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp25P57080 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms