Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.66■□□□□ 0.26
Brca1P48754 Gm19220-201ENSMUST00000222682 803 ntBASIC16.66■□□□□ 0.26
Brca1P48754 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brca1P48754 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Brca1P48754 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.66■□□□□ 0.26
Brca1P48754 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brca1P48754 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brca1P48754 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brca1P48754 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Brca1P48754 Gm13392-201ENSMUST00000117708 150 ntBASIC16.66■□□□□ 0.26
Brca1P48754 Gm12957-201ENSMUST00000117835 377 ntBASIC16.66■□□□□ 0.26
Brca1P48754 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Brca1P48754 Gm8062-201ENSMUST00000139696 444 ntBASIC16.66■□□□□ 0.26
Brca1P48754 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Brca1P48754 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brca1P48754 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Brca1P48754 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Brca1P48754 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brca1P48754 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Brca1P48754 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brca1P48754 Snora78-201ENSMUST00000158630 128 ntBASIC16.65■□□□□ 0.26
Brca1P48754 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brca1P48754 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.65■□□□□ 0.26
Brca1P48754 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.65■□□□□ 0.26
Brca1P48754 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.65■□□□□ 0.26
Brca1P48754 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brca1P48754 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brca1P48754 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brca1P48754 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Brca1P48754 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.65■□□□□ 0.26
Brca1P48754 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Brca1P48754 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Brca1P48754 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Brca1P48754 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.64■□□□□ 0.25
Brca1P48754 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brca1P48754 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Brca1P48754 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Brca1P48754 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.64■□□□□ 0.25
Brca1P48754 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.64■□□□□ 0.25
Brca1P48754 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Brca1P48754 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brca1P48754 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brca1P48754 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.64■□□□□ 0.25
Brca1P48754 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Brca1P48754 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Brca1P48754 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Brca1P48754 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.64■□□□□ 0.25
Brca1P48754 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brca1P48754 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brca1P48754 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brca1P48754 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Brca1P48754 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brca1P48754 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Brca1P48754 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Brca1P48754 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Brca1P48754 Gm10275-202ENSMUST00000168697 495 ntBASIC16.63■□□□□ 0.25
Brca1P48754 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.63■□□□□ 0.25
Brca1P48754 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.63■□□□□ 0.25
Brca1P48754 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Brca1P48754 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.63■□□□□ 0.25
Brca1P48754 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Gm10275-201ENSMUST00000092620 635 ntBASIC16.63■□□□□ 0.25
Brca1P48754 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Brca1P48754 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.63■□□□□ 0.25
Brca1P48754 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Gm13226-201ENSMUST00000117838 404 ntBASIC16.63■□□□□ 0.25
Brca1P48754 Gm12390-201ENSMUST00000117897 397 ntBASIC16.63■□□□□ 0.25
Brca1P48754 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.63■□□□□ 0.25
Brca1P48754 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Brca1P48754 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Brca1P48754 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC16.63■□□□□ 0.25
Brca1P48754 Gm9257-201ENSMUST00000221254 232 ntBASIC16.63■□□□□ 0.25
Brca1P48754 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Brca1P48754 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Brca1P48754 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Brca1P48754 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brca1P48754 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Brca1P48754 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.62■□□□□ 0.25
Brca1P48754 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms