Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-2P42580 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Nkx1-2P42580 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Gm21362-201ENSMUST00000194272 928 ntBASIC18.52■□□□□ 0.56
Nkx1-2P42580 Gm44357-201ENSMUST00000195897 142 ntBASIC18.52■□□□□ 0.56
Nkx1-2P42580 Gm19658-201ENSMUST00000196231 138 ntBASIC18.52■□□□□ 0.56
Nkx1-2P42580 Gm44367-201ENSMUST00000196836 138 ntBASIC18.52■□□□□ 0.56
Nkx1-2P42580 Gm44350-201ENSMUST00000197197 138 ntBASIC18.52■□□□□ 0.56
Nkx1-2P42580 Gm44390-201ENSMUST00000197533 144 ntBASIC18.52■□□□□ 0.56
Nkx1-2P42580 Gm44313-201ENSMUST00000198018 138 ntBASIC18.52■□□□□ 0.56
Nkx1-2P42580 Gm44486-201ENSMUST00000198508 138 ntBASIC18.52■□□□□ 0.56
Nkx1-2P42580 Gm44314-201ENSMUST00000199263 138 ntBASIC18.52■□□□□ 0.56
Nkx1-2P42580 Gm44394-201ENSMUST00000199558 138 ntBASIC18.52■□□□□ 0.56
Nkx1-2P42580 Gm44484-201ENSMUST00000199873 138 ntBASIC18.52■□□□□ 0.56
Nkx1-2P42580 Gm44466-201ENSMUST00000200264 138 ntBASIC18.52■□□□□ 0.56
Nkx1-2P42580 Gm44359-201ENSMUST00000200671 138 ntBASIC18.52■□□□□ 0.56
Nkx1-2P42580 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx1-2P42580 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx1-2P42580 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Nkx1-2P42580 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx1-2P42580 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Nkx1-2P42580 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx1-2P42580 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-2P42580 CT030684.3-201ENSMUST00000227308 2445 ntBASIC18.51■□□□□ 0.55
Nkx1-2P42580 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Nkx1-2P42580 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nkx1-2P42580 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-2P42580 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-2P42580 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-2P42580 Gm34391-201ENSMUST00000203706 907 ntBASIC18.51■□□□□ 0.55
Nkx1-2P42580 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.51■□□□□ 0.55
Nkx1-2P42580 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-2P42580 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.51■□□□□ 0.55
Nkx1-2P42580 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.51■□□□□ 0.55
Nkx1-2P42580 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.51■□□□□ 0.55
Nkx1-2P42580 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-2P42580 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.51■□□□□ 0.55
Nkx1-2P42580 Gm19863-201ENSMUST00000192480 2218 ntBASIC18.51■□□□□ 0.55
Nkx1-2P42580 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-2P42580 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.51■□□□□ 0.55
Nkx1-2P42580 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx1-2P42580 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.5■□□□□ 0.55
Nkx1-2P42580 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Gm4535-201ENSMUST00000182274 558 ntBASIC18.5■□□□□ 0.55
Nkx1-2P42580 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.5■□□□□ 0.55
Nkx1-2P42580 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Gm10355-201ENSMUST00000097146 517 ntBASIC18.5■□□□□ 0.55
Nkx1-2P42580 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.5■□□□□ 0.55
Nkx1-2P42580 Gm37691-201ENSMUST00000192147 2573 ntBASIC18.5■□□□□ 0.55
Nkx1-2P42580 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx1-2P42580 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-2P42580 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.49■□□□□ 0.55
Nkx1-2P42580 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC18.49■□□□□ 0.55
Nkx1-2P42580 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx1-2P42580 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.49■□□□□ 0.55
Nkx1-2P42580 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms