Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf9P41274 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf9P41274 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.38□□□□□ -0.11
Tnfsf9P41274 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.38□□□□□ -0.11
Tnfsf9P41274 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.37□□□□□ -0.11
Tnfsf9P41274 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf9P41274 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tnfsf9P41274 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.37□□□□□ -0.11
Tnfsf9P41274 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf9P41274 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Gm13365-201ENSMUST00000121188 973 ntBASIC14.36□□□□□ -0.11
Tnfsf9P41274 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.36□□□□□ -0.11
Tnfsf9P41274 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.36□□□□□ -0.11
Tnfsf9P41274 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.36□□□□□ -0.11
Tnfsf9P41274 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.36□□□□□ -0.11
Tnfsf9P41274 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms