Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox6P40645 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox6P40645 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox6P40645 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sox6P40645 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Sox6P40645 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sox6P40645 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Sox6P40645 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Sox6P40645 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.15□□□□□ -0.14
Sox6P40645 Gm12134-201ENSMUST00000122109 520 ntBASIC14.15□□□□□ -0.14
Sox6P40645 Gm12497-201ENSMUST00000138778 237 ntBASIC14.15□□□□□ -0.14
Sox6P40645 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.15□□□□□ -0.14
Sox6P40645 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sox6P40645 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.15□□□□□ -0.14
Sox6P40645 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Sox6P40645 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox6P40645 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sox6P40645 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sox6P40645 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Sox6P40645 Gm7153-201ENSMUST00000117092 455 ntBASIC14.14□□□□□ -0.15
Sox6P40645 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.14□□□□□ -0.15
Sox6P40645 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Sox6P40645 Gm43347-201ENSMUST00000200226 580 ntBASIC14.14□□□□□ -0.15
Sox6P40645 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.14□□□□□ -0.15
Sox6P40645 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.14□□□□□ -0.15
Sox6P40645 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.14□□□□□ -0.15
Sox6P40645 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.14□□□□□ -0.15
Sox6P40645 Birc2-201ENSMUST00000054878 378 ntBASIC14.14□□□□□ -0.15
Sox6P40645 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sox6P40645 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.14□□□□□ -0.15
Sox6P40645 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.14□□□□□ -0.15
Sox6P40645 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox6P40645 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sox6P40645 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Sox6P40645 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Sox6P40645 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gm24589-201ENSMUST00000116692 94 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gm8825-201ENSMUST00000182565 998 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gm4518-201ENSMUST00000182638 718 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gm7506-201ENSMUST00000207758 815 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.13□□□□□ -0.15
Sox6P40645 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms