Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Gm11425-201ENSMUST00000119608 498 ntBASIC15.41■□□□□ 0.06
Cxcl12P40224 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.41■□□□□ 0.06
Cxcl12P40224 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cxcl12P40224 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.41■□□□□ 0.06
Cxcl12P40224 Gm9396-201ENSMUST00000076703 567 ntBASIC15.41■□□□□ 0.06
Cxcl12P40224 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Cxcl12P40224 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Cxcl12P40224 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cxcl12P40224 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Cxcl12P40224 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cxcl12P40224 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
Cxcl12P40224 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.4■□□□□ 0.06
Cxcl12P40224 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cxcl12P40224 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cxcl12P40224 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cxcl12P40224 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cxcl12P40224 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cxcl12P40224 Gm4984-201ENSMUST00000115987 360 ntBASIC15.4■□□□□ 0.06
Cxcl12P40224 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.4■□□□□ 0.06
Cxcl12P40224 Gm6222-201ENSMUST00000120787 396 ntBASIC15.4■□□□□ 0.06
Cxcl12P40224 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.4■□□□□ 0.06
Cxcl12P40224 Gm9229-201ENSMUST00000222777 126 ntBASIC15.4■□□□□ 0.06
Cxcl12P40224 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cxcl12P40224 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cxcl12P40224 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cxcl12P40224 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cxcl12P40224 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cxcl12P40224 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cxcl12P40224 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cxcl12P40224 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.39■□□□□ 0.05
Cxcl12P40224 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.39■□□□□ 0.05
Cxcl12P40224 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cxcl12P40224 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.39■□□□□ 0.05
Cxcl12P40224 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cxcl12P40224 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm13216-201ENSMUST00000117145 591 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21854-201ENSMUST00000179901 471 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm27631-201ENSMUST00000184163 466 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm29310-201ENSMUST00000185468 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21825-201ENSMUST00000185728 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm29109-201ENSMUST00000185895 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21896-201ENSMUST00000186520 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21873-201ENSMUST00000186728 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21794-201ENSMUST00000187056 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21880-201ENSMUST00000187275 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21826-201ENSMUST00000187451 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21198-201ENSMUST00000188393 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21749-201ENSMUST00000189343 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21901-201ENSMUST00000189568 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm29424-201ENSMUST00000189716 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm28599-201ENSMUST00000189838 694 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21867-201ENSMUST00000189917 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm29269-201ENSMUST00000190087 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21722-201ENSMUST00000190153 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm28423-201ENSMUST00000190701 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21899-201ENSMUST00000190745 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21910-201ENSMUST00000191163 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21849-201ENSMUST00000191571 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm28678-201ENSMUST00000191593 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm20910-201ENSMUST00000193268 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm21871-201ENSMUST00000194621 696 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cxcl12P40224 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.39■□□□□ 0.05
Cxcl12P40224 Gm19220-201ENSMUST00000222682 803 ntBASIC15.39■□□□□ 0.05
Cxcl12P40224 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.39■□□□□ 0.05
Cxcl12P40224 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms