Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Sftpa1P35242 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Sftpa1P35242 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Sftpa1P35242 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.86□□□□□ -0.19
Sftpa1P35242 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sftpa1P35242 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sftpa1P35242 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.85□□□□□ -0.19
Sftpa1P35242 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sftpa1P35242 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sftpa1P35242 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.85□□□□□ -0.19
Sftpa1P35242 Gm6912-201ENSMUST00000117218 544 ntBASIC13.85□□□□□ -0.19
Sftpa1P35242 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.85□□□□□ -0.19
Sftpa1P35242 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sftpa1P35242 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.85□□□□□ -0.19
Sftpa1P35242 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.85□□□□□ -0.19
Sftpa1P35242 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sftpa1P35242 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sftpa1P35242 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.85□□□□□ -0.19
Sftpa1P35242 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sftpa1P35242 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sftpa1P35242 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sftpa1P35242 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.84□□□□□ -0.19
Sftpa1P35242 Gm43433-201ENSMUST00000196573 481 ntBASIC13.84□□□□□ -0.19
Sftpa1P35242 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Sftpa1P35242 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.84□□□□□ -0.19
Sftpa1P35242 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sftpa1P35242 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sftpa1P35242 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sftpa1P35242 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sftpa1P35242 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sftpa1P35242 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sftpa1P35242 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sftpa1P35242 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sftpa1P35242 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sftpa1P35242 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sftpa1P35242 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sftpa1P35242 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sftpa1P35242 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sftpa1P35242 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sftpa1P35242 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sftpa1P35242 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sftpa1P35242 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Sftpa1P35242 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.83□□□□□ -0.2
Sftpa1P35242 Gm23984-201ENSMUST00000157139 203 ntBASIC13.83□□□□□ -0.2
Sftpa1P35242 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sftpa1P35242 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sftpa1P35242 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sftpa1P35242 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sftpa1P35242 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms