Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mmp13P33435 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.42■□□□□ 0.06
Mmp13P33435 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mmp13P33435 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.42■□□□□ 0.06
Mmp13P33435 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mmp13P33435 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Mmp13P33435 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Mmp13P33435 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.41■□□□□ 0.06
Mmp13P33435 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Mmp13P33435 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Mmp13P33435 Gm13418-201ENSMUST00000119097 944 ntBASIC15.41■□□□□ 0.06
Mmp13P33435 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Mmp13P33435 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.41■□□□□ 0.06
Mmp13P33435 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Mmp13P33435 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.41■□□□□ 0.06
Mmp13P33435 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.41■□□□□ 0.06
Mmp13P33435 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Mmp13P33435 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.41■□□□□ 0.06
Mmp13P33435 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.41■□□□□ 0.06
Mmp13P33435 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Mmp13P33435 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Mmp13P33435 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Mmp13P33435 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Mmp13P33435 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mmp13P33435 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mmp13P33435 Gm12134-201ENSMUST00000122109 520 ntBASIC15.4■□□□□ 0.06
Mmp13P33435 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Mmp13P33435 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.4■□□□□ 0.06
Mmp13P33435 Gm18733-201ENSMUST00000173950 856 ntBASIC15.4■□□□□ 0.06
Mmp13P33435 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.4■□□□□ 0.06
Mmp13P33435 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.4■□□□□ 0.06
Mmp13P33435 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.4■□□□□ 0.06
Mmp13P33435 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mmp13P33435 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.4■□□□□ 0.06
Mmp13P33435 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mmp13P33435 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.4■□□□□ 0.06
Mmp13P33435 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Mmp13P33435 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mmp13P33435 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mmp13P33435 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Mmp13P33435 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mmp13P33435 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mmp13P33435 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.4■□□□□ 0.06
Mmp13P33435 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mmp13P33435 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mmp13P33435 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.4■□□□□ 0.06
Mmp13P33435 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Mmp13P33435 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mmp13P33435 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.39■□□□□ 0.05
Mmp13P33435 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Mmp13P33435 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.39■□□□□ 0.05
Mmp13P33435 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Mmp13P33435 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.39■□□□□ 0.05
Mmp13P33435 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.39■□□□□ 0.05
Mmp13P33435 Gm44771-201ENSMUST00000206975 626 ntBASIC15.39■□□□□ 0.05
Mmp13P33435 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.39■□□□□ 0.05
Mmp13P33435 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.39■□□□□ 0.05
Mmp13P33435 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Mmp13P33435 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Mmp13P33435 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Mmp13P33435 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.39■□□□□ 0.05
Mmp13P33435 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms