Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Gm12260-201ENSMUST00000122447 411 ntBASIC15.26■□□□□ 0.03
Slc6a13P31649 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Slc6a13P31649 Gm5177-201ENSMUST00000183092 997 ntBASIC15.26■□□□□ 0.03
Slc6a13P31649 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.26■□□□□ 0.03
Slc6a13P31649 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.26■□□□□ 0.03
Slc6a13P31649 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a13P31649 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a13P31649 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.26■□□□□ 0.03
Slc6a13P31649 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.26■□□□□ 0.03
Slc6a13P31649 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a13P31649 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a13P31649 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a13P31649 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a13P31649 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a13P31649 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Slc6a13P31649 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.26■□□□□ 0.03
Slc6a13P31649 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.25■□□□□ 0.03
Slc6a13P31649 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Slc6a13P31649 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.25■□□□□ 0.03
Slc6a13P31649 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.25■□□□□ 0.03
Slc6a13P31649 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
Slc6a13P31649 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Slc6a13P31649 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.25■□□□□ 0.03
Slc6a13P31649 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.25■□□□□ 0.03
Slc6a13P31649 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.25■□□□□ 0.03
Slc6a13P31649 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Slc6a13P31649 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.25■□□□□ 0.03
Slc6a13P31649 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a13P31649 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Slc6a13P31649 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Slc6a13P31649 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Slc6a13P31649 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.24■□□□□ 0.03
Slc6a13P31649 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.24■□□□□ 0.03
Slc6a13P31649 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a13P31649 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.23■□□□□ 0.03
Slc6a13P31649 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.23■□□□□ 0.03
Slc6a13P31649 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Slc6a13P31649 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Slc6a13P31649 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Gm16198-201ENSMUST00000118766 670 ntBASIC15.23■□□□□ 0.03
Slc6a13P31649 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.23■□□□□ 0.03
Slc6a13P31649 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Slc6a13P31649 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Slc6a13P31649 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.23■□□□□ 0.03
Slc6a13P31649 Gm45747-201ENSMUST00000212203 999 ntBASIC15.23■□□□□ 0.03
Slc6a13P31649 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.23■□□□□ 0.03
Slc6a13P31649 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.23■□□□□ 0.03
Slc6a13P31649 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Slc6a13P31649 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a13P31649 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms