Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcam1P29533 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcam1P29533 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcam1P29533 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcam1P29533 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcam1P29533 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.22■□□□□ 0.35
Vcam1P29533 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Vcam1P29533 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Vcam1P29533 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Vcam1P29533 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Vcam1P29533 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Vcam1P29533 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Vcam1P29533 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Vcam1P29533 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Vcam1P29533 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Vcam1P29533 Gm27437-201ENSMUST00000183429 107 ntBASIC17.21■□□□□ 0.35
Vcam1P29533 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.21■□□□□ 0.35
Vcam1P29533 Mir6977-201ENSMUST00000184960 64 ntBASIC17.21■□□□□ 0.35
Vcam1P29533 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Vcam1P29533 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcam1P29533 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
Vcam1P29533 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Vcam1P29533 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vcam1P29533 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vcam1P29533 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Vcam1P29533 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Vcam1P29533 Gm5566-201ENSMUST00000116118 459 ntBASIC17.2■□□□□ 0.34
Vcam1P29533 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.2■□□□□ 0.34
Vcam1P29533 Gm8749-201ENSMUST00000117737 331 ntBASIC17.2■□□□□ 0.34
Vcam1P29533 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.2■□□□□ 0.34
Vcam1P29533 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.2■□□□□ 0.34
Vcam1P29533 Gm9719-201ENSMUST00000162765 543 ntBASIC17.2■□□□□ 0.34
Vcam1P29533 Mir8102-201ENSMUST00000184148 139 ntBASIC17.2■□□□□ 0.34
Vcam1P29533 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Vcam1P29533 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.2■□□□□ 0.34
Vcam1P29533 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcam1P29533 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.19■□□□□ 0.34
Vcam1P29533 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcam1P29533 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcam1P29533 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.19■□□□□ 0.34
Vcam1P29533 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Vcam1P29533 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcam1P29533 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcam1P29533 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcam1P29533 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.19■□□□□ 0.34
Vcam1P29533 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.19■□□□□ 0.34
Vcam1P29533 Gm14767-201ENSMUST00000121559 586 ntBASIC17.19■□□□□ 0.34
Vcam1P29533 Mir7684-201ENSMUST00000183858 60 ntBASIC17.19■□□□□ 0.34
Vcam1P29533 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.19■□□□□ 0.34
Vcam1P29533 Gm45098-201ENSMUST00000207179 657 ntBASIC17.19■□□□□ 0.34
Vcam1P29533 Gm7775-201ENSMUST00000218871 853 ntBASIC17.19■□□□□ 0.34
Vcam1P29533 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcam1P29533 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcam1P29533 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcam1P29533 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vcam1P29533 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcam1P29533 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Vcam1P29533 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vcam1P29533 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcam1P29533 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcam1P29533 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcam1P29533 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vcam1P29533 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcam1P29533 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms