Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CenpbP27790 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CenpbP27790 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CenpbP27790 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CenpbP27790 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CenpbP27790 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CenpbP27790 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CenpbP27790 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.3■□□□□ 0.84
CenpbP27790 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CenpbP27790 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.3■□□□□ 0.84
CenpbP27790 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.3■□□□□ 0.84
CenpbP27790 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CenpbP27790 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CenpbP27790 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CenpbP27790 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CenpbP27790 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CenpbP27790 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CenpbP27790 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CenpbP27790 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CenpbP27790 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CenpbP27790 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CenpbP27790 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.29■□□□□ 0.84
CenpbP27790 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CenpbP27790 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CenpbP27790 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CenpbP27790 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CenpbP27790 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CenpbP27790 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CenpbP27790 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.29■□□□□ 0.84
CenpbP27790 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CenpbP27790 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CenpbP27790 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CenpbP27790 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CenpbP27790 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CenpbP27790 AC117194.1-201ENSMUST00000224847 3002 ntBASIC20.29■□□□□ 0.84
CenpbP27790 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
CenpbP27790 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CenpbP27790 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CenpbP27790 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC20.28■□□□□ 0.84
CenpbP27790 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CenpbP27790 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Mir5122-201ENSMUST00000175004 89 ntBASIC20.28■□□□□ 0.84
CenpbP27790 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CenpbP27790 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.28■□□□□ 0.84
CenpbP27790 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.28■□□□□ 0.84
CenpbP27790 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
CenpbP27790 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CenpbP27790 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CenpbP27790 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC20.28■□□□□ 0.84
CenpbP27790 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CenpbP27790 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CenpbP27790 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CenpbP27790 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CenpbP27790 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CenpbP27790 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CenpbP27790 Carlr-201ENSMUST00000181515 2574 ntBASIC20.27■□□□□ 0.84
CenpbP27790 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CenpbP27790 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.27■□□□□ 0.84
CenpbP27790 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.27■□□□□ 0.84
CenpbP27790 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CenpbP27790 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CenpbP27790 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CenpbP27790 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CenpbP27790 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC20.27■□□□□ 0.83
CenpbP27790 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CenpbP27790 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CenpbP27790 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CenpbP27790 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CenpbP27790 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CenpbP27790 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CenpbP27790 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CenpbP27790 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CenpbP27790 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.26■□□□□ 0.83
CenpbP27790 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms