Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Gm25406-201ENSMUST00000157599 105 ntBASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.32□□□□□ -0.44
Tnfrsf9P20334 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Gm13616-201ENSMUST00000120600 222 ntBASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Gm27300-201ENSMUST00000184085 97 ntBASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Gm27335-201ENSMUST00000184758 97 ntBASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Gm8396-201ENSMUST00000057361 823 ntBASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf9P20334 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 AA543401-201ENSMUST00000164248 1269 ntBASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Gm44492-201ENSMUST00000197012 141 ntBASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Gm18622-201ENSMUST00000219361 595 ntBASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf9P20334 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms