Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxa3P02831 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.63□□□□□ -0.39
Hoxa3P02831 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxa3P02831 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Hoxa3P02831 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.63□□□□□ -0.39
Hoxa3P02831 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxa3P02831 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Hoxa3P02831 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Gm44492-201ENSMUST00000197012 141 ntBASIC12.63□□□□□ -0.39
Hoxa3P02831 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.63□□□□□ -0.39
Hoxa3P02831 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxa3P02831 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxa3P02831 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.63□□□□□ -0.39
Hoxa3P02831 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxa3P02831 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxa3P02831 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxa3P02831 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Hoxa3P02831 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.62□□□□□ -0.39
Hoxa3P02831 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.62□□□□□ -0.39
Hoxa3P02831 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxa3P02831 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Hoxa3P02831 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hoxa3P02831 Gm45747-201ENSMUST00000212203 999 ntBASIC12.62□□□□□ -0.39
Hoxa3P02831 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Hoxa3P02831 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.62□□□□□ -0.39
Hoxa3P02831 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxa3P02831 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Hoxa3P02831 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxa3P02831 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxa3P02831 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxa3P02831 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hoxa3P02831 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.61□□□□□ -0.39
Hoxa3P02831 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.61□□□□□ -0.39
Hoxa3P02831 Gm8318-201ENSMUST00000182954 872 ntBASIC12.61□□□□□ -0.39
Hoxa3P02831 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxa3P02831 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.61□□□□□ -0.39
Hoxa3P02831 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.61□□□□□ -0.39
Hoxa3P02831 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxa3P02831 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hoxa3P02831 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxa3P02831 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hoxa3P02831 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxa3P02831 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxa3P02831 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms