Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CopeO89079 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CopeO89079 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CopeO89079 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CopeO89079 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CopeO89079 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CopeO89079 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.55■□□□□ 0.08
CopeO89079 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CopeO89079 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CopeO89079 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CopeO89079 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CopeO89079 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CopeO89079 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CopeO89079 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CopeO89079 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CopeO89079 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CopeO89079 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CopeO89079 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CopeO89079 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CopeO89079 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CopeO89079 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CopeO89079 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CopeO89079 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CopeO89079 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CopeO89079 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.54■□□□□ 0.08
CopeO89079 Gm8318-201ENSMUST00000182954 872 ntBASIC15.54■□□□□ 0.08
CopeO89079 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CopeO89079 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CopeO89079 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.54■□□□□ 0.08
CopeO89079 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CopeO89079 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.54■□□□□ 0.08
CopeO89079 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CopeO89079 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CopeO89079 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CopeO89079 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CopeO89079 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CopeO89079 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.53■□□□□ 0.08
CopeO89079 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.53■□□□□ 0.08
CopeO89079 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.53■□□□□ 0.08
CopeO89079 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.53■□□□□ 0.08
CopeO89079 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.53■□□□□ 0.08
CopeO89079 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.53■□□□□ 0.08
CopeO89079 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CopeO89079 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.53■□□□□ 0.08
CopeO89079 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.53■□□□□ 0.08
CopeO89079 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CopeO89079 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CopeO89079 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CopeO89079 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CopeO89079 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CopeO89079 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CopeO89079 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CopeO89079 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CopeO89079 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.52■□□□□ 0.08
CopeO89079 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.52■□□□□ 0.08
CopeO89079 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.52■□□□□ 0.08
CopeO89079 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CopeO89079 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CopeO89079 Gm27867-201ENSMUST00000184778 125 ntBASIC15.52■□□□□ 0.08
CopeO89079 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.52■□□□□ 0.08
CopeO89079 Gm7506-201ENSMUST00000207758 815 ntBASIC15.52■□□□□ 0.08
CopeO89079 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.52■□□□□ 0.08
CopeO89079 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.52■□□□□ 0.08
CopeO89079 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CopeO89079 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CopeO89079 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CopeO89079 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CopeO89079 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CopeO89079 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CopeO89079 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CopeO89079 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.52■□□□□ 0.07
CopeO89079 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
CopeO89079 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CopeO89079 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.52■□□□□ 0.07
CopeO89079 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CopeO89079 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.52■□□□□ 0.07
CopeO89079 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CopeO89079 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CopeO89079 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CopeO89079 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CopeO89079 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.51■□□□□ 0.07
CopeO89079 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CopeO89079 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms