Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.51□□□□□ -0.25
Cops3O88543 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.51□□□□□ -0.25
Cops3O88543 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.51□□□□□ -0.25
Cops3O88543 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cops3O88543 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.51□□□□□ -0.25
Cops3O88543 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.51□□□□□ -0.25
Cops3O88543 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.5□□□□□ -0.25
Cops3O88543 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.5□□□□□ -0.25
Cops3O88543 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.5□□□□□ -0.25
Cops3O88543 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cops3O88543 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Gm8344-201ENSMUST00000119813 856 ntBASIC13.5□□□□□ -0.25
Cops3O88543 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.5□□□□□ -0.25
Cops3O88543 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.5□□□□□ -0.25
Cops3O88543 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.5□□□□□ -0.25
Cops3O88543 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.5□□□□□ -0.25
Cops3O88543 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.5□□□□□ -0.25
Cops3O88543 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.5□□□□□ -0.25
Cops3O88543 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cops3O88543 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops3O88543 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cops3O88543 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cops3O88543 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.49□□□□□ -0.25
Cops3O88543 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 Gm12497-201ENSMUST00000138778 237 ntBASIC13.49□□□□□ -0.25
Cops3O88543 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Cops3O88543 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cops3O88543 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cops3O88543 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cops3O88543 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.49□□□□□ -0.25
Cops3O88543 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Cops3O88543 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops3O88543 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.48□□□□□ -0.25
Cops3O88543 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Cops3O88543 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.48□□□□□ -0.25
Cops3O88543 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.48□□□□□ -0.25
Cops3O88543 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.48□□□□□ -0.25
Cops3O88543 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms