Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.67□□□□□ -0.22
Rnf13O54965 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.67□□□□□ -0.22
Rnf13O54965 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.66□□□□□ -0.22
Rnf13O54965 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.66□□□□□ -0.22
Rnf13O54965 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.66□□□□□ -0.22
Rnf13O54965 Gm18622-201ENSMUST00000219361 595 ntBASIC13.66□□□□□ -0.22
Rnf13O54965 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rnf13O54965 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.66□□□□□ -0.22
Rnf13O54965 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.66□□□□□ -0.22
Rnf13O54965 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rnf13O54965 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rnf13O54965 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rnf13O54965 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rnf13O54965 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rnf13O54965 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf13O54965 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Rnf13O54965 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Rnf13O54965 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rnf13O54965 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.65□□□□□ -0.22
Rnf13O54965 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rnf13O54965 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.65□□□□□ -0.22
Rnf13O54965 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Rnf13O54965 Gm8344-201ENSMUST00000119813 856 ntBASIC13.65□□□□□ -0.22
Rnf13O54965 Olfr129-201ENSMUST00000122318 993 ntBASIC13.65□□□□□ -0.22
Rnf13O54965 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.65□□□□□ -0.22
Rnf13O54965 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.65□□□□□ -0.22
Rnf13O54965 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.65□□□□□ -0.22
Rnf13O54965 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.65□□□□□ -0.22
Rnf13O54965 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rnf13O54965 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.65□□□□□ -0.22
Rnf13O54965 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rnf13O54965 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.65□□□□□ -0.22
Rnf13O54965 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.65□□□□□ -0.22
Rnf13O54965 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rnf13O54965 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf13O54965 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Rnf13O54965 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf13O54965 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf13O54965 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf13O54965 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf13O54965 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Rnf13O54965 Gm27742-201ENSMUST00000184667 60 ntBASIC13.64□□□□□ -0.23
Rnf13O54965 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.64□□□□□ -0.23
Rnf13O54965 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf13O54965 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms