Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.35□□□□□ -0.11
Clk3O35492 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Clk3O35492 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.35□□□□□ -0.11
Clk3O35492 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.35□□□□□ -0.11
Clk3O35492 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.35□□□□□ -0.11
Clk3O35492 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clk3O35492 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Clk3O35492 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk3O35492 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk3O35492 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk3O35492 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clk3O35492 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk3O35492 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk3O35492 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk3O35492 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk3O35492 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.34□□□□□ -0.11
Clk3O35492 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk3O35492 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.34□□□□□ -0.11
Clk3O35492 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.34□□□□□ -0.11
Clk3O35492 Gm8344-201ENSMUST00000119813 856 ntBASIC14.34□□□□□ -0.11
Clk3O35492 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.34□□□□□ -0.11
Clk3O35492 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.34□□□□□ -0.11
Clk3O35492 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Clk3O35492 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.34□□□□□ -0.11
Clk3O35492 Gm19164-201ENSMUST00000210667 640 ntBASIC14.34□□□□□ -0.11
Clk3O35492 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.34□□□□□ -0.11
Clk3O35492 Gm18622-201ENSMUST00000219361 595 ntBASIC14.34□□□□□ -0.11
Clk3O35492 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.34□□□□□ -0.11
Clk3O35492 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Clk3O35492 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clk3O35492 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Clk3O35492 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk3O35492 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk3O35492 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk3O35492 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Clk3O35492 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk3O35492 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clk3O35492 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clk3O35492 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clk3O35492 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clk3O35492 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.33□□□□□ -0.11
Clk3O35492 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clk3O35492 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Clk3O35492 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clk3O35492 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Clk3O35492 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clk3O35492 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.33□□□□□ -0.11
Clk3O35492 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.33□□□□□ -0.11
Clk3O35492 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clk3O35492 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.33□□□□□ -0.12
Clk3O35492 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Clk3O35492 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Clk3O35492 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.33□□□□□ -0.12
Clk3O35492 Gm8097-201ENSMUST00000117903 829 ntBASIC14.33□□□□□ -0.12
Clk3O35492 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 Gm34391-201ENSMUST00000203706 907 ntBASIC14.33□□□□□ -0.12
Clk3O35492 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.33□□□□□ -0.12
Clk3O35492 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.33□□□□□ -0.12
Clk3O35492 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.33□□□□□ -0.12
Clk3O35492 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Clk3O35492 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Clk3O35492 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.33□□□□□ -0.12
Clk3O35492 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Clk3O35492 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Clk3O35492 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clk3O35492 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Clk3O35492 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clk3O35492 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk3O35492 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk3O35492 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.32□□□□□ -0.12
Clk3O35492 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk3O35492 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clk3O35492 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms