Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Capn1O35350 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Capn1O35350 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Capn1O35350 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Capn1O35350 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Capn1O35350 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.96□□□□□ -0.17
Capn1O35350 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Capn1O35350 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Capn1O35350 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.96□□□□□ -0.17
Capn1O35350 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.96□□□□□ -0.17
Capn1O35350 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Capn1O35350 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.96□□□□□ -0.17
Capn1O35350 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Capn1O35350 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.96□□□□□ -0.17
Capn1O35350 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Capn1O35350 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Capn1O35350 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Capn1O35350 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.96□□□□□ -0.17
Capn1O35350 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Capn1O35350 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Capn1O35350 Asic1-205ENSMUST00000228185 1818 ntBASIC13.96□□□□□ -0.17
Capn1O35350 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Capn1O35350 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Capn1O35350 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Capn1O35350 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Capn1O35350 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Capn1O35350 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Capn1O35350 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Capn1O35350 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.95□□□□□ -0.18
Capn1O35350 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.95□□□□□ -0.18
Capn1O35350 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Gm7787-201ENSMUST00000216858 688 ntBASIC13.95□□□□□ -0.18
Capn1O35350 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.95□□□□□ -0.18
Capn1O35350 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Capn1O35350 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Capn1O35350 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Capn1O35350 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.94□□□□□ -0.18
Capn1O35350 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.94□□□□□ -0.18
Capn1O35350 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Capn1O35350 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.94□□□□□ -0.18
Capn1O35350 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Gm13597-201ENSMUST00000121239 375 ntBASIC13.94□□□□□ -0.18
Capn1O35350 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.94□□□□□ -0.18
Capn1O35350 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.94□□□□□ -0.18
Capn1O35350 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.94□□□□□ -0.18
Capn1O35350 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Capn1O35350 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.94□□□□□ -0.18
Capn1O35350 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Capn1O35350 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Capn1O35350 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Capn1O35350 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Capn1O35350 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
Capn1O35350 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Capn1O35350 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Capn1O35350 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.93□□□□□ -0.18
Capn1O35350 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms